{"id":17,"date":"2012-06-25T15:19:35","date_gmt":"2012-06-25T13:19:35","guid":{"rendered":"http:\/\/localhost\/infosyslab-wp\/index.php\/lisbeth\/"},"modified":"2023-02-22T10:38:22","modified_gmt":"2023-02-22T09:38:22","slug":"lisbeth","status":"publish","type":"page","link":"https:\/\/infosyslab.fr\/index.php\/ressources\/logiciels\/lisbeth\/","title":{"rendered":"LisBeth"},"content":{"rendered":"<p><!--?php\n$block = module_invoke('block', 'block_view', 23);\nprint $block['content'];\n?--><\/p>\n<hr class=\"lisbeth\">\n<p><strong>Comment nous citer<\/strong> : Zarag\u00fceta-Bagils R., Ung V., Grand A., Vignes-Lebbe R., Cao N., Ducasse J, 2012 <span class=\"publication\"><a href=\"\" onclick=\"window.open ('http:\/\/dx.doi.org\/10.1016\/j.crpv.2012.07.002')\">LisBeth : New cladistics for phylogenetics and biogeography.<\/a><\/span> C.R Palevol 11(8):563-566..<\/p>\n<p>LisBeth est un programme qui impl\u00e9mente une m\u00e9thodologie trop peu connue en recherche cladistique: l&rsquo;analyse \u00e0 3 \u00e9l\u00e9ments &#8211; 3ia &#8211; (Three Items Analysis). Cette m\u00e9thodologie s&rsquo;applique \u00e0 la reconstruction phylog\u00e9n\u00e9tique et \u00e0 la biog\u00e9ographie.<br \/>\nL&rsquo;approche 3ia a commenc\u00e9 avec les travaux de Gary Nelson, Norman Platnick et Pauline Ladiges (Nelson et Ladiges 1991 ; Nelson et Platnick 1991 ; Nelson et Ladiges 1992 ; Nelson et Ladiges 1996) dans les ann\u00e9es 90.<br \/>\nPlus r\u00e9cemment, les travaux de David M. Williams et de Malte C. Ebach ont notamment permis de grandes avanc\u00e9es th\u00e9oriques.<\/p>\n<p><span class=\"newsletter\"><strong>Histoire de la 3ia<\/strong><\/span><\/p>\n<p>Peu de programmes informatiques ont \u00e9t\u00e9 d\u00e9velopp\u00e9s autour de la 3ia :<\/p>\n<ul>\n<li>le premier a \u00e9t\u00e9 d\u00e9velopp\u00e9 par G. Nelson et P. Ladiges (1992) et ne fonctionne que sur les syst\u00e8mes Windows. Il convertit les matrices traditionnelles en une matrice transform\u00e9e dont le format est analysable par les diff\u00e9rents logiciels de parsimonie. Ce programme inclut \u00e9galement le logiciel TASS (Nelson and Ladiges 1996) qui impl\u00e9mente l&rsquo;algorithme de suppression de la paralogie dans les arbres pour les \u00e9tudes de biog\u00e9ographie (paralogy-free subtree analysis).<\/li>\n<li>3item, un programme d\u00e9velopp\u00e9 en Java (Ebach, Newman et al. 2003) d\u00e9di\u00e9 \u00e0 la biog\u00e9ographie mais abandonn\u00e9.<\/li>\n<p><span class=\"ressources\"><a href=\"http:\/\/lis-upmc.snv.jussieu.fr\/lis\/?q=en\/resources\/software\/lisbeth\">en savoir plus&#8230;(version anglaise)<\/a><\/span><\/ul>\n","protected":false},"excerpt":{"rendered":"<p>Comment nous citer : Zarag\u00fceta-Bagils R., Ung V., Grand A., Vignes-Lebbe R., Cao N., Ducasse J, 2012 LisBeth : New cladistics for phylogenetics and biogeography. C.R Palevol 11(8):563-566.. LisBeth est un programme qui impl\u00e9mente une m\u00e9thodologie trop peu connue en recherche cladistique: l&rsquo;analyse \u00e0 3 \u00e9l\u00e9ments &#8211; 3ia &#8211; (Three Items Analysis). Cette m\u00e9thodologie s&rsquo;applique [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":9,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-17","page","type-page","status-publish","hentry"],"blocksy_meta":{"styles_descriptor":{"styles":{"desktop":"","tablet":"","mobile":""},"google_fonts":[],"version":6}},"_links":{"self":[{"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/pages\/17","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/comments?post=17"}],"version-history":[{"count":1,"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/pages\/17\/revisions"}],"predecessor-version":[{"id":534,"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/pages\/17\/revisions\/534"}],"up":[{"embeddable":true,"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/pages\/9"}],"wp:attachment":[{"href":"https:\/\/infosyslab.fr\/index.php\/wp-json\/wp\/v2\/media?parent=17"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}